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Mario Chirinos Colunga
GeoSentinel
Commits
1f7fb95e
Commit
1f7fb95e
authored
Oct 16, 2018
by
Mario Chirinos Colunga
💬
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Plain Diff
60m
parent
a6ed1c8b
Pipeline
#4
failed with stages
Changes
3
Pipelines
1
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3 changed files
with
18 additions
and
18 deletions
+18
-18
ExtractData.sh
tools/ExtractData.sh
+12
-12
L2ASCL_AreaProcessing.sh
tools/L2ASCL_AreaProcessing.sh
+2
-2
mergeImages.sh
tools/mergeImages.sh
+4
-4
No files found.
tools/ExtractData.sh
View file @
1f7fb95e
...
@@ -2,13 +2,13 @@
...
@@ -2,13 +2,13 @@
FILE
=
$1
FILE
=
$1
JP2DIR
=
$2
#JP2 Output Directory
JP2DIR
=
$2
#JP2 Output Directory
#S2A_MSIL2A_
20170515T162341_N0205_R040_T16QBJ_2
0170515T163103.zip
#S2A_MSIL2A_
60170515T162341_N0605_R040_T16QBJ_6
0170515T163103.zip
filepattern
=
$(
echo
$FILE
|
cut
-d
"_"
-f6
)
"_"
$(
echo
$FILE
|
cut
-d
"_"
-f3
)
"_"
#T16QBJ_
2
0170515T162341_
filepattern
=
$(
echo
$FILE
|
cut
-d
"_"
-f6
)
"_"
$(
echo
$FILE
|
cut
-d
"_"
-f3
)
"_"
#T16QBJ_
6
0170515T162341_
productType
=
$(
echo
$filepattern
|
cut
-d
"_"
-f2
)
#MSIL2A
productType
=
$(
echo
$filepattern
|
cut
-d
"_"
-f2
)
#MSIL2A
tile
=
$(
echo
$filepattern
|
cut
-d
"_"
-f1
)
#T16QBJ
tile
=
$(
echo
$filepattern
|
cut
-d
"_"
-f1
)
#T16QBJ
datetime
=
$(
echo
$filepattern
|
cut
-d
"_"
-f2
)
#
2
0170515T162341
datetime
=
$(
echo
$filepattern
|
cut
-d
"_"
-f2
)
#
6
0170515T162341
dateText
=
$(
echo
$datetime
|
cut
-d
"T"
-f1
)
#
2
0170515
dateText
=
$(
echo
$datetime
|
cut
-d
"T"
-f1
)
#
6
0170515
outDir
=
$JP2DIR$dateText
"/"
outDir
=
$JP2DIR$dateText
"/"
...
@@ -19,21 +19,21 @@ echo $outDir
...
@@ -19,21 +19,21 @@ echo $outDir
if
[
!
-d
$outDir
]
;
then
if
[
!
-d
$outDir
]
;
then
mkdir
$outDir
mkdir
$outDir
fi
fi
if
[
!
-e
$filePrefix
"TCI_10m.jp2"
-o
!
-e
$filePrefix
"TCI_
20m.jp2"
-o
!
-e
$filePrefix
"SCL_2
0m.jp2"
]
;
then
if
[
!
-e
$filePrefix
"TCI_10m.jp2"
-o
!
-e
$filePrefix
"TCI_
60m.jp2"
-o
!
-e
$filePrefix
"SCL_6
0m.jp2"
]
;
then
unzip
-n
-j
$FILE
*
TCI_10m.jp2
*
TCI_
20m.jp2
*
SCL_2
0m.jp2
-d
$JP2DIR$dateText
unzip
-n
-j
$FILE
*
TCI_10m.jp2
*
TCI_
60m.jp2
*
SCL_6
0m.jp2
-d
$JP2DIR$dateText
TCI10m
=
$outDir
"L2A_"
$filepattern
"TCI_10m.jp2"
TCI10m
=
$outDir
"L2A_"
$filepattern
"TCI_10m.jp2"
TCI
20m
=
$outDir
"L2A_"
$filepattern
"TCI_2
0m.jp2"
TCI
60m
=
$outDir
"L2A_"
$filepattern
"TCI_6
0m.jp2"
SCL
20m
=
$outDir
"L2A_"
$filepattern
"SCL_2
0m.jp2"
SCL
60m
=
$outDir
"L2A_"
$filepattern
"SCL_6
0m.jp2"
if
[
-e
$TCI10m
]
;
then
if
[
-e
$TCI10m
]
;
then
mv
$TCI10m
$filePrefix
"TCI_10m.jp2"
mv
$TCI10m
$filePrefix
"TCI_10m.jp2"
fi
fi
if
[
-e
$TCI
2
0m
]
;
then
if
[
-e
$TCI
6
0m
]
;
then
mv
$TCI
20m
$filePrefix
"TCI_2
0m.jp2"
mv
$TCI
60m
$filePrefix
"TCI_6
0m.jp2"
fi
fi
if
[
-e
$SCL
2
0m
]
;
then
if
[
-e
$SCL
6
0m
]
;
then
mv
$SCL
20m
$filePrefix
"SCL_2
0m.jp2"
mv
$SCL
60m
$filePrefix
"SCL_6
0m.jp2"
fi
fi
else
else
echo
PASS
$FILE
echo
PASS
$FILE
...
...
tools/L2ASCL_AreaProcessing.sh
View file @
1f7fb95e
...
@@ -41,7 +41,7 @@ cd jp2/merge_out/
...
@@ -41,7 +41,7 @@ cd jp2/merge_out/
if
[
!
-d
"SCL"
]
;
then
if
[
!
-d
"SCL"
]
;
then
mkdir
SCL
mkdir
SCL
fi
fi
cp
*
SCL_
2
0m.tif SCL
cp
*
SCL_
6
0m.tif SCL
cd
SCL
cd
SCL
ls
*
.tif | parallel
--jobs
4 imageMissingData.py
{}
50
ls
*
.tif | parallel
--jobs
4 imageMissingData.py
{}
50
...
@@ -66,5 +66,5 @@ SCLimageListToJSON.sh $USERDIR"jp2/merge_out/SCL/" $USERDIR"mask.json" 6
...
@@ -66,5 +66,5 @@ SCLimageListToJSON.sh $USERDIR"jp2/merge_out/SCL/" $USERDIR"mask.json" 6
mv
*
.json json
mv
*
.json json
cd
json
cd
json
mergeL2ASCL_JSON.py
$USERDIR
"jp2/merge_out/SCL/json/"
>
$USERDIR
"scl_data.json"
mergeL2ASCL_JSON.py
$USERDIR
"jp2/merge_out/SCL/json/"
>
$USERDIR
"scl_data.json"
#mv *SCL_
2
0m.tif json
#mv *SCL_
6
0m.tif json
#cd json
#cd json
tools/mergeImages.sh
View file @
1f7fb95e
...
@@ -24,15 +24,15 @@ else
...
@@ -24,15 +24,15 @@ else
echo
PASSING
$CROPEDIMAGE
FOUND
echo
PASSING
$CROPEDIMAGE
FOUND
fi
fi
##------------------------------------------------------------------------------
##------------------------------------------------------------------------------
MERGEDIMAGE
=
$DIRNAME
"_SCL_
2
0m_merged.tif"
MERGEDIMAGE
=
$DIRNAME
"_SCL_
6
0m_merged.tif"
if
[
!
-e
$MERGEDIMAGE
]
;
then
if
[
!
-e
$MERGEDIMAGE
]
;
then
echo
"gdal_merge.py -o "
$MERGEDIMAGE
$(
ls
*
SCL_
2
0m.jp2
)
echo
"gdal_merge.py -o "
$MERGEDIMAGE
$(
ls
*
SCL_
6
0m.jp2
)
gdal_merge.py
-o
$MERGEDIMAGE
$(
ls
*
SCL_
2
0m.jp2
)
gdal_merge.py
-o
$MERGEDIMAGE
$(
ls
*
SCL_
6
0m.jp2
)
else
else
echo
PASSING
$MERGEDIMAGE
FOUND
echo
PASSING
$MERGEDIMAGE
FOUND
fi
fi
CROPEDIMAGE
=
../merge_out/
$DIRNAME
"_SCL_
2
0m.tif"
CROPEDIMAGE
=
../merge_out/
$DIRNAME
"_SCL_
6
0m.tif"
if
[
!
-e
$CROPEDIMAGE
]
;
then
if
[
!
-e
$CROPEDIMAGE
]
;
then
gdal_translate
-projwin
$BOX
-projwin_srs
WGS84
-ot
Byte
-of
JPEG
$MERGEDIMAGE
$CROPEDIMAGE
gdal_translate
-projwin
$BOX
-projwin_srs
WGS84
-ot
Byte
-of
JPEG
$MERGEDIMAGE
$CROPEDIMAGE
else
else
...
...
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