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GeoSentinel
GeoSentinel
Commit f186f7df authored by Mario Chirinos Colunga's avatar Mario Chirinos Colunga 💬
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ndvi

parent a590935c
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Showing with 106 additions and 106 deletions
tools/productListToIndex.sh
View file @ f186f7df
......@@ -11,58 +11,58 @@ echo $POLYGON
BOX=$(python3 $HOME/GeoSentinel/geosentinel/polygonToBox.py "$POLYGON")
echo $BOX
#cd $PRODCUTSDIR
cd $PRODCUTSDIR
#for f in $(find . -type f -name '*.zip')
#do
for f in $(find . -type f -name '*.zip')
do
# filepattern=$(echo $f | cut -d"_" -f6)"_"$(echo $f | cut -d"_" -f3)"_B"
# filename=$JP2DIR$filepattern
# echo $filename
# if [ ! -e $filename$B1".jp2" ]; then
filepattern=$(echo $f | cut -d"_" -f6)"_"$(echo $f | cut -d"_" -f3)"_B"
filename=$JP2DIR$filepattern
echo $filename
if [ ! -e $filename$B1".jp2" ]; then
# unzip" -n -j $f *"$B2".jp2 -d " $JP2DIR
# fi
unzip" -n -j $f *"$B2".jp2 -d " $JP2DIR
fi
# if [ ! -e $filename$B2".jp2" ]; then
if [ ! -e $filename$B2".jp2" ]; then
# unzip" -n -j $f *"$B1".jp2 -d " $JP2DIR
# fi
unzip" -n -j $f *"$B1".jp2 -d " $JP2DIR
fi
#
# cd $JP2DIR
# $B1FN=$(ls $filepattern$B1".jp2" -t |head -1)
# $B2FN=$(ls $filepattern$B1".jp2" -t |head -1)
# echo "B1-"$B1FN
# echo "B2-"$B2FN
cd $JP2DIR
$B1FN=$(ls $filepattern$B1".jp2" -t |head -1)
$B2FN=$(ls $filepattern$B1".jp2" -t |head -1)
# if [ ! -d $OUTPUTDIR ]; then
# mkdir $OUTPUTDIR
# fi
echo "B1-"$B1FN
echo "B2-"$B2FN
# fileout1=$(echo $filepattern | cut -d"_" -f1)
# fileout2=$(echo $filepattern | cut -d"_" -f2)
if [ ! -d $OUTPUTDIR ]; then
mkdir $OUTPUTDIR
fi
# if [ ! -e $OUTPUTDIR"/"$fileout2"_"$fileout1".tiff" ]; then
# python3 $HOME/GeoSentinel/geosentinel/normalizedIndex.py $B1FN $B2FN $OUTPUTDIR"/"$fileout2"_"$fileout1".tiff"
# fi
fileout1=$(echo $filepattern | cut -d"_" -f1)
fileout2=$(echo $filepattern | cut -d"_" -f2)
# cd $OUTPUTDIR
# if [ ! -d $fileout1 ]; then
# mkdir $fileout1
# fi
# cd ..
if [ ! -e $OUTPUTDIR"/"$fileout2"_"$fileout1".tiff" ]; then
python3 $HOME/GeoSentinel/geosentinel/normalizedIndex.py $B1FN $B2FN $OUTPUTDIR"/"$fileout2"_"$fileout1".tiff"
fi
# if [ ! -e $OUTPUTDIR$fileout1/$fileout2"_"$fileout1".jpg" ]; then
# gdal_translate -projwin $BOX -projwin_srs WGS84 -ot Byte -scale 0 255 0 255 -of JPEG $OUTPUTDIR$$fileout2"_"$fileout1".tiff" $OUTPUTDIR$fileout1/$fileout2"_"$fileout1".jpg"
# fi
cd $OUTPUTDIR
if [ ! -d $fileout1 ]; then
mkdir $fileout1
fi
cd ..
#
# cd $PRODCUTSDIR
if [ ! -e $OUTPUTDIR$fileout1/$fileout2"_"$fileout1".jpg" ]; then
gdal_translate -projwin $BOX -projwin_srs WGS84 -ot Byte -scale 0 255 0 255 -of JPEG $OUTPUTDIR$$fileout2"_"$fileout1".tiff" $OUTPUTDIR$fileout1/$fileout2"_"$fileout1".jpg"
fi
#done
#cd $JP2DIR"/video_ndvi"
#ffmpeg -i %*.jpg -c:v libx264 -vf fps=10 -pix_fmt yuvj422p ndvi.mp4
cd $PRODCUTSDIR
done
cd $JP2DIR"/video_ndvi"
ffmpeg -i %*.jpg -c:v libx264 -vf fps=10 -pix_fmt yuvj422p ndvi.mp4
tools/productListToRGB.sh
View file @ f186f7df
......@@ -2,73 +2,73 @@
PRODCUTSDIR=$1 #Products directory
JP2DIR=$2 #JP2 Directory
POLYGON=$3 #Crop Window
echo $POLYGON
BOX=$(python3 $HOME/GeoSentinel/geosentinel/polygonToBox.py "$POLYGON")
echo $BOX
#cd $PRODCUTSDIR
#for f in $(find . -type f -name '*.zip')
#do
# filepattern=$(echo $f | cut -d"_" -f6)"_"$(echo $f | cut -d"_" -f3)"_B"
# filename=$JP2DIR$filepattern
# echo $filename
# if [ ! -e $filename"02.jp2" -o ! -e $filename"03.jp2" -o ! -e $filename"04.jp2" ]; then
# unzip -n -j $f *B02.jp2 *B03.jp2 *B04.jp2 -d $JP2DIR
# else
# echo PASS $f
# fi
#
# cd $JP2DIR
# red=$(ls $filepattern"04.jp2" -t |head -1)
# green=$(ls $filepattern"03.jp2" -t |head -1)
# blue=$(ls $filepattern"02.jp2" -t |head -1)
# echo "red-"$red
# echo "gre-"$green
# echo "blu-"$blue
# if [ ! -d "rgb" ]; then
# mkdir rgb
# fi
# fileout1=$(echo $filepattern | cut -d"_" -f1)
# fileout2=$(echo $filepattern | cut -d"_" -f2)
cd $PRODCUTSDIR
for f in $(find . -type f -name '*.zip')
do
#
# if [ ! -e rgb/$fileout2"_"$fileout1".tiff" ]; then
# gdal_merge.py -separate -co PHOTOMETRIC=RGB -o rgb/$fileout2"_"$fileout1".tiff" $filepattern"04.jp2" $filepattern"03.jp2" $filepattern"02.jp2"
# fi
filepattern=$(echo $f | cut -d"_" -f6)"_"$(echo $f | cut -d"_" -f3)"_B"
filename=$JP2DIR$filepattern
echo $filename
if [ ! -e $filename"02.jp2" -o ! -e $filename"03.jp2" -o ! -e $filename"04.jp2" ]; then
unzip -n -j $f *B02.jp2 *B03.jp2 *B04.jp2 -d $JP2DIR
else
echo PASS $f
fi
# cd rgb
# if [ ! -d $fileout1 ]; then
# mkdir $fileout1
# fi
# cd ..
cd $JP2DIR
red=$(ls $filepattern"04.jp2" -t |head -1)
green=$(ls $filepattern"03.jp2" -t |head -1)
blue=$(ls $filepattern"02.jp2" -t |head -1)
echo "red-"$red
echo "gre-"$green
echo "blu-"$blue
if [ ! -d "rgb" ]; then
mkdir rgb
fi
# if [ ! -e rgb/$fileout1/$fileout2"_"$fileout1".jpg" ]; then
fileout1=$(echo $filepattern | cut -d"_" -f1)
fileout2=$(echo $filepattern | cut -d"_" -f2)
# gdal_translate -projwin $BOX -projwin_srs WGS84 -ot Byte -scale 0 4096 0 255 -of JPEG rgb/$fileout2"_"$fileout1".tiff" rgb/$fileout1/$fileout2"_"$fileout1".jpg"
## convert rgb/$fileout1/$fileout2"_"$fileout1"_t.jpg" -resize 640x480\! rgb/$fileout1/$fileout2"_"$fileout1".jpg"
## rm rgb/$fileout1/$fileout2"_"$fileout1"_t.jpg"
if [ ! -e rgb/$fileout2"_"$fileout1".tiff" ]; then
gdal_merge.py -separate -co PHOTOMETRIC=RGB -o rgb/$fileout2"_"$fileout1".tiff" $filepattern"04.jp2" $filepattern"03.jp2" $filepattern"02.jp2"
fi
cd rgb
if [ ! -d $fileout1 ]; then
mkdir $fileout1
fi
cd ..
if [ ! -e rgb/$fileout1/$fileout2"_"$fileout1".jpg" ]; then
gdal_translate -projwin $BOX -projwin_srs WGS84 -ot Byte -scale 0 4096 0 255 -of JPEG rgb/$fileout2"_"$fileout1".tiff" rgb/$fileout1/$fileout2"_"$fileout1".jpg"
# convert rgb/$fileout1/$fileout2"_"$fileout1"_t.jpg" -resize 640x480\! rgb/$fileout1/$fileout2"_"$fileout1".jpg"
# rm rgb/$fileout1/$fileout2"_"$fileout1"_t.jpg"
fi
cd $PRODCUTSDIR
done
# if [ ! -d "video" ]; then
# mkdir video
# fi
# cd $PRODCUTSDIR
#done
## if [ ! -d "video" ]; then
## mkdir video
## fi
#cd $JP2DIR"rgb/"
#for d in */; do
# # Will print */ if no directories are available
# cd $d
## VIDEONAME = $(echo $d/ | cut -d"/" -f1)
## ffmpeg -i %*.jpg -c:v libx264 -vf fps=10 -pix_fmt yuvj422p $VIDEONAME.mp4
# rm *.xml
# cd ..
#done
##ffmpeg -i %*.jpg -c:v libx264 -vf fps=10 -pix_fmt yuvj422p rgb.mp4
cd $JP2DIR"rgb/"
for d in */; do
# Will print */ if no directories are available
cd $d
# VIDEONAME = $(echo $d/ | cut -d"/" -f1)
# ffmpeg -i %*.jpg -c:v libx264 -vf fps=10 -pix_fmt yuvj422p $VIDEONAME.mp4
rm *.xml
cd ..
done
#ffmpeg -i %*.jpg -c:v libx264 -vf fps=10 -pix_fmt yuvj422p rgb.mp4
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